Find Research Outputs

2019

Development of Poly(A)-ClickSeq as a tool enabling simultaneous genome-wide poly(A)-site identification and differential expression analysis

Elrod, N. D., Jaworski, E. A., Ji, P., Wagner, E. & Routh, A., Jan 1 2019, (Accepted/In press) In : Methods.

Research output: Contribution to journalArticle

Poly A
Genes
Genome
RNA
Gene Expression

Didymin by suppressing NF-κB activation prevents VEGF-induced angiogenesis in vitro and in vivo

Shukla, K., Sonowal, H., Saxena, A. & Ramana, K., Jan 1 2019, (Accepted/In press) In : Vascular Pharmacology.

Research output: Contribution to journalArticle

Vascular Endothelial Growth Factor A
Human Umbilical Vein Endothelial Cells
Neoplasms
E-Selectin
Vascular Cell Adhesion Molecule-1

Diet-induced obesity causes hypothalamic neurochemistry alterations in Swiss mice

de Bona Schraiber, R., Haas de Mello, A., Garcez, M. L., de Bem Silveira, G., Zacaron, R. P., de Souza Goldim, M. P., Budni, J., Silveira, P. C. L., Petronilho, F., Ferreira, G. K. & Rezin, G. T., Jan 1 2019, (Accepted/In press) In : Metabolic brain disease.

Research output: Contribution to journalArticle

Neurochemistry
Nutrition
Animals
Obesity
Hypothalamus

Disparities in HPV vaccination rates and HPV prevalence in the United States: a review of the literature

Hirth, J., Jan 2 2019, In : Human Vaccines and Immunotherapeutics. 15, 1, p. 146-155 10 p.

Research output: Contribution to journalReview article

Vaccination
Papillomavirus Vaccines
Uterine Cervical Neoplasms
Condylomata Acuminata
Public Policy

Editorial: Basic research in bladder cancer – refining the tools. 3rd IBCN seminars series1

Black, P. C., Goebell, P. J., Kamat, A. M., Nawroth, R., Seiler, R., Williams, S. & Schmitz-Dräger, B. J., Jan 1 2019, (Accepted/In press) In : Urologic Oncology: Seminars and Original Investigations.

Research output: Contribution to journalArticle

Urinary Bladder Neoplasms
Organoids
Research
Manuscripts
Neoplasms

Effect of N-(2-aminoethyl) ethanolamine on hypertrophic scarring changes in vitro: Finding novel anti-fibrotic therapies

Chen, Z., Gu, J., El Ayadi, A., Oberhauser, A., Zhou, J., Sousse, L., Finnerty, C., Herndon, D. & Boor, P. J., Jan 1 2019, In : Toxicology and Applied Pharmacology. 362, p. 9-19 11 p.

Research output: Contribution to journalArticle

Ethanolamine
Hypertrophic Cicatrix
Cicatrix
Fibroblasts
Extracellular Matrix
2 Citations

Efficacy of novel highly specific bromodomain-containing protein 4 inhibitors in innate inflammation–driven airway remodeling

Tian, B., Liu, Z., Litvinov, J., Maroto, R., Jamaluddin, M., Rytting, E., Patrikeev, I., Ochoa, L., Vargas, G., Motamedi, M., Ameredes, B., Zhou, J. & Brasier, A. R., Jan 1 2019, In : American journal of respiratory cell and molecular biology. 60, 1, p. 68-83 16 p.

Research output: Contribution to journalArticle

Airway Remodeling
Inflammation
Toll-Like Receptor 3
Histone Acetyltransferases
Myofibroblasts
1 Citations

Emerging roles of Fgf14 in behavioral control

Hoxha, E., Marcinnò, A., Montarolo, F., Masante, L., Balbo, I., Ravera, F., Laezza, F. & Tempia, F., Jan 1 2019, In : Behavioural Brain Research. 356, p. 257-265 9 p.

Research output: Contribution to journalArticle

Knockout Mice
Behavior Control
Social Problems
Street Drugs
Locomotion
Hypoxia-Inducible Factor 1
Aldehyde Reductase
Proteasome Endopeptidase Complex
Colonic Neoplasms
Vascular Endothelial Growth Factor A
Aldehyde Reductase
Macrophages
Lipopolysaccharides

Exercise and probiotics attenuate the development of Alzheimer's disease in transgenic mice: Role of microbiome

Abraham, D., Feher, J., Scuderi, G. L., Szabo, D., Dobolyi, A., Cservenak, M., Juhasz, J., Ligeti, B., Pongor, S., Gomez-Cabrera, M. C., Vina, J., Higuchi, M., Suzuki, K., Boldogh, I. & Radak, Z., Jan 1 2019, In : Experimental Gerontology. 115, p. 122-131 10 p.

Research output: Contribution to journalArticle

Microbiota
Probiotics
Transgenic Mice
Alzheimer Disease
Amyloid

Exosomes Cause Preterm Birth in Mice: Evidence for Paracrine Signaling in Pregnancy

Sheller-Miller, S., Trivedi, J., Yellon, S. M. & Menon, R., Dec 1 2019, In : Scientific reports. 9, 1, 608.

Research output: Contribution to journalArticle

Paracrine Communication
Exosomes
Premature Birth
Pregnancy
Mothers

Factors Associated With Recurrence of Barrett's Esophagus After Radiofrequency Ablation

Tan, M. C., Kanthasamy, K. A., Yeh, A. G., Kil, D., Pompeii, L., Yu, X., El-Serag, H. B. & Thrift, A. P., Jan 1 2019, In : Clinical Gastroenterology and Hepatology. 17, 1, p. 65-72.e5

Research output: Contribution to journalArticle

Barrett Esophagus
Recurrence
Metaplasia
Veterans
Neoplasms

Feasibility of cellular bioenergetics as a biomarker in porphyria patients

Chacko, B., Culp, M. L., Bloomer, J., Phillips, J., Kuo, Y. F., Darley-Usmar, V. & Singal, A. K., Jun 1 2019, In : Molecular Genetics and Metabolism Reports. 19, 100451.

Research output: Contribution to journalArticle

Porphyrias
Energy Metabolism
Biomarkers
Erythropoietic Protoporphyria
Porphyria Cutanea Tarda

Ferroptosis inhibitor SRS 16-86 attenuates ferroptosis and promotes functional recovery in contusion spinal cord injury

Zhang, Y., Sun, C., Zhao, C., Hao, J., Zhang, Y., Fan, B., Li, B., Duan, H., Liu, C., Kong, X., Wu, P., Yao, X. & Feng, S., Mar 1 2019, In : Brain research. 1706, p. 48-57 10 p.

Research output: Contribution to journalArticle

Contusions
Spinal Cord Injuries
Cell Death
Spinal Cord Regeneration
Intercellular Adhesion Molecule-1

Fibrogenic Gene Expression in Hepatic Stellate Cells Induced by HCV and HIV Replication in a Three Cell Co-Culture Model System

Akil, A., Endsley, M., Shanmugam, S., Saldarriaga, O., Somasunderam, A., Spratt, H., Stevenson-Lerner, H., Utay, N. S., Ferguson, M. & Yi, M. K., Dec 1 2019, In : Scientific reports. 9, 1, 568.

Research output: Contribution to journalArticle

Hepatic Stellate Cells
Virus Replication
Coculture Techniques
Hepacivirus
Virus Diseases

Functional Status Is Associated With 30-Day Potentially Preventable Readmissions Following Home Health Care

Middleton, A., Downer, B., Haas, A., Knox, S. & Ottenbacher, K., Feb 1 2019, In : Medical care. 57, 2, p. 145-151 7 p.

Research output: Contribution to journalArticle

Home Care Services
Confidence Intervals
Self Care
Delivery of Health Care
Cognition

H2S, a Bacterial Defense Mechanism against the Host Immune Response

Toliver-Kinsky, T., Cui, W., Törö, G., Lee, S-J., Shatalin, K., Nudler, E. & Szabo, C., Jan 1 2019, In : Infection and immunity. 87, 1

Research output: Contribution to journalArticle

Staphylococcus aureus
Escherichia coli
Bacteria
Hydrogen Sulfide
Opportunistic Infections

HIV-induced neuroinflammation: impact of PAR1 and PAR2 processing by Furin

Sachan, V., Lodge, R., Mihara, K., Hamelin, J., Power, C., Gelman, B., Hollenberg, M. D., Cohen, É. A. & Seidah, N. G., Jan 1 2019, (Accepted/In press) In : Cell Death and Differentiation.

Research output: Contribution to journalArticle

Furin
HIV
Proprotein Convertases
trans-Golgi Network
Protein Transport

How do chemokines navigate neutrophils to the target site: Dissecting the structural mechanisms and signaling pathways

Rajarathnam, K., Schnoor, M., Richardson, R. M. & Rajagopal, S., Feb 1 2019, In : Cellular Signalling. 54, p. 69-80 12 p.

Research output: Contribution to journalReview article

Chemokines
GTP-Binding Proteins
Neutrophils
Interleukin-8B Receptors
Interleukin-8A Receptors

Human skeletal muscle macrophages increase following cycle training and are associated with adaptations that may facilitate growth

Walton, R. G., Kosmac, K., Mula, J., Fry, C., Peck, B. D., Groshong, J. S., Finlin, B. S., Zhu, B., Kern, P. A. & Peterson, C. A., Dec 1 2019, In : Scientific reports. 9, 1, 969.

Research output: Contribution to journalArticle

Skeletal Muscle
Macrophages
Exercise
Growth
Hypertrophy

Impact of Burn-Related Amputations on Return to Work: Findings From the Burn Injury Model System National Database

Carrougher, G. J., McMullen, K., Mandell, S. P., Amtmann, D., Kowalske, K. J., Schneider, J. C., Herndon, D. & Gibran, N. S., Jan 1 2019, In : Journal of burn care & research : official publication of the American Burn Association. 40, 1, p. 21-28 8 p.

Research output: Contribution to journalArticle

Return to Work
Burns
Amputation
Databases
Wounds and Injuries

Increased Mortality in Mice following Immunoprophylaxis Therapy with High Dosage of Nicotinamide in Burkholderia Persistent Infections

Micheva-Viteva, S. N., Ross, B. N., Gao, J., Adikari, S., Zhang, P., Mourant, J. R., Wu, T. H., Werner, J. H., Torres, A. & Hong-Geller, E., Jan 1 2019, In : Infection and immunity. 87, 1

Research output: Contribution to journalArticle

Burkholderia Infections
Niacinamide
Mortality
Anti-Bacterial Agents
Therapeutics

Inhibition of Phosphoglycerate Mutase 5 Reduces Necroptosis in Rat Hearts Following Ischemia/Reperfusion Through Suppression of Dynamin-Related Protein 1

She, L., Tu, H., Zhang, Y. Z., Tang, L. J., Li, N. S., Ma, Q. L., Liu, B., Li, Q., Luo, X. J. & Peng, J., Jan 1 2019, (Accepted/In press) In : Cardiovascular Drugs and Therapy.

Research output: Contribution to journalArticle

Phosphoglycerate Mutase
Dynamins
Reperfusion
Ischemia
Proteins
Biological Therapy
Interleukin-13
Interleukin-5
Interleukin-4
Asthma

Laparoscopic repair of long-gap rectal atresia

Ahn, M., Cummins, C. B., Tran, S. & Bowen-Jallow, K., Mar 1 2019, In : Journal of Pediatric Surgery Case Reports. 42, p. 54-57 4 p.

Research output: Contribution to journalArticle

Colostomy
Fistula
Anorectal Malformations

Measuring Clinical Productivity of Anesthesiology Groups: Surgical Anesthesia at the Facility Level

Abouleish, A., Hudson, M. E. & Whitten, C. W., Feb 1 2019, In : Anesthesiology. 130, 2, p. 336-348 13 p.

Research output: Contribution to journalArticle

Anesthesiology
Anesthesia
Benchmarking
Operating Rooms
Industry

Meeting the challenge of tick-borne disease control: A proposal for 1000 Ixodes genomes

Murgia, M. V., Bell-Sakyi, L., de la Fuente, J., Kurtti, T. J., Makepeace, B. L., Mans, B., McCoy, K. D., Munderloh, U., Plantard, O., Rispe, C., Valle, M. R., Tabor, A., Thangamani, S., Thimmapuram, J. & Hill, C. A., Jan 1 2019, In : Ticks and Tick-borne Diseases. 10, 1, p. 213-218 6 p.

Research output: Contribution to journalLetter

Tick-Borne Diseases
tick-borne diseases
Ixodes
disease control
Genome

Middle East Respiratory Syndrome Vaccine Candidates: Cautious Optimism

Schindewolf, C. & Menachery, V., Jan 17 2019, In : Viruses. 11, 1

Research output: Contribution to journalReview article

Coronavirus Infections
Vaccines
Coronavirus
Animal Models
Clinical Trials

Mycobacterium tuberculosis type III-A CRISPR/Cas system crRNA and its maturation have atypical features

Wei, W., Zhang, S., Fleming, J., Chen, Y., Li, Z., Fan, S., Liu, Y., Wang, W., Wang, T., Liu, Y., Ren, B., Wang, M., Jiao, J., Chen, Y., Zhou, Y., Zhou, Y., Gu, S., Zhang, X., Wan, L., Chen, T. & 6 othersZhou, L., Chen, Y., Zhang, X. E., Li, C., Zhang, H. & Bi, L., Jan 1 2019, In : FASEB Journal. 33, 1, p. 1496-1509 14 p.

Research output: Contribution to journalArticle

CRISPR-Associated Proteins
Clustered Regularly Interspaced Short Palindromic Repeats
Mycobacterium tuberculosis
RNA
RNA Cleavage

National Trends of Percutaneous Coronary Intervention in Patients ≥70 Years of Age

Elbadawi, A., Elgendy, I. Y., Ha, L. D., Saad, M., Mahmoud, K., Ogunbayo, G. O., Kumfa, P., Rangasetty, U. & Gilani, S., Feb 15 2019, In : American Journal of Cardiology. 123, 4, p. 701-703 3 p.

Research output: Contribution to journalLetter

Nudt21 regulates the alternative polyadenylation of Pak1 and is predictive in the prognosis of glioblastoma patients

Chu, Y., Elrod, N., Wang, C., Li, L., Chen, T., Routh, A., Xia, Z., Li, W., Wagner, E. & Ji, P., Jan 1 2019, In : Oncogene.

Research output: Contribution to journalArticle

Polyadenylation
Glioblastoma
3' Untranslated Regions
Glioma
Genes

Obstructive sleep apnea with chronic obstructive pulmonary disease among medicare beneficiaries

Starr, P., Agarwal, A., Singh, G., Hsu, E., Zhang, W., Kuo, Y. F., Boethel, C. & Sharma, G., Jan 1 2019, In : Annals of the American Thoracic Society. 16, 1, p. 153-156 4 p.

Research output: Contribution to journalLetter

Obstructive Sleep Apnea
Medicare
Chronic Obstructive Pulmonary Disease

Orphan Receptor GPR88 as an Emerging Neurotherapeutic Target

Ye, N., Li, B., Mao, Q., Wold, E. A., Tian, S., Allen, J. A. & Zhou, J., Jan 16 2019, In : ACS Chemical Neuroscience. 10, 1, p. 190-200 11 p.

Research output: Contribution to journalReview article

G-Protein-Coupled Receptors
Ligands
Brain
Pharmaceutical Preparations
Pharmacology

Outcomes of pleomorphic lobular carcinoma versus invasive lobular carcinoma

Haque, W., Arms, A., Verma, V., Hatch, S., Brian Butler, E. & Teh, B. S., Feb 1 2019, In : Breast. 43, p. 67-73 7 p.

Research output: Contribution to journalArticle

Lobular Carcinoma
Survival
Histology
Databases
Breast Neoplasms
Rickettsia
Immune System Diseases
Infection
Actins
Endothelial Cells

Pathology and Pathogenesis of Chagas Heart Disease

Bonney, K. M., Luthringer, D. J., Kim, S. A., Garg, N. & Engman, D. M., Jan 1 2019, In : Annual Review of Pathology: Mechanisms of Disease. 14, p. 421-447 27 p.

Research output: Contribution to journalReview article

Chagas Disease
Trypanosoma cruzi
Heart Diseases
Pathology
Parasites

Personality testing may identify applicants who will become successful in general surgery residency

Hughes, B. D., Perone, J. A., Cummins, C. B., Sommerhalder, C., Tyler, D., Bowen-Jallow, K. & Radhakrishnan, R., Jan 1 2019, In : Journal of Surgical Research. 233, p. 240-248 9 p.

Research output: Contribution to journalArticle

Internship and Residency
Personality
Personality Tests
Industry

Pfannenstiel versus Vertical Skin Incision for Cesarean Delivery in Women with Class III Obesity: A Randomized Trial

Marrs, C., Blackwell, S., Hester, A., Olson, G., Saade, G., Faro, J., Pedroza, C. & Sibai, B., Jan 1 2019, In : American Journal of Perinatology. 36, 1, p. 97-104 8 p.

Research output: Contribution to journalArticle

Obesity
Skin
Bayes Theorem
Wounds and Injuries
Body Mass Index
2 Citations

Physical Performance Trajectories and Mortality Among Older Mexican Americans

Mutambudzi, M., Chen, N. W., Howrey, B., Garcia, M. A. & Markides, K., Jan 16 2019, In : The journals of gerontology. Series A, Biological sciences and medical sciences. 74, 2, p. 233-239 7 p.

Research output: Contribution to journalArticle

Mortality
Confidence Intervals
Odds Ratio
Hispanic Americans
Proportional Hazards Models

Physical therapist’s clinical reasoning in patients with gait impairments from hemiplegia

Seale, J. & Utsey, C., Jan 1 2019, (Accepted/In press) In : Physiotherapy Theory and Practice.

Research output: Contribution to journalArticle

Hemiplegia
Physical Therapists
Gait
Orthotic Devices
Social Responsibility

Popliteal Versus Local Field Block for Pain-Related Postoperative Unplanned Emergency Room Visits After Foot and Ankle Surgery

Graney, C., Shibuya, N., Patel, H. & Jupiter, D., Jan 1 2019, (Accepted/In press) In : Foot and Ankle Specialist.

Research output: Contribution to journalArticle

Postoperative Pain
Ankle
Hospital Emergency Service
Foot
Mathematical Computing

Price of disorder in the lac repressor hinge helix

Seckfort, D. & Pettitt, B., Jan 1 2019, In : Biopolymers. 110, 1, e23239.

Research output: Contribution to journalArticle

Lac Repressors
Hinges
Repressor Proteins
Proteins
Lac Operon

Pro- and anti-inflammatory effects of sulforaphane on placental cytokine production

Arita, Y., Jeong Park, H., Cantillon, A., Verma, K., Menon, R., Getahun, D. & Peltier, M. R., Feb 1 2019, In : Journal of Reproductive Immunology. 131, p. 44-49 6 p.

Research output: Contribution to journalArticle

Anti-Inflammatory Agents
Cytokines
Cytokine Receptor gp130
Interleukin-6
Brain-Derived Neurotrophic Factor
Endoscopic Ultrasound-Guided Fine Needle Aspiration
Liver Transplantation
Hepatocellular Carcinoma
Recurrence
Liver Diseases

Reducing diagnostic errors worldwide through diagnostic management teams

Verna, R., Velazquez, A. B. & Laposata, M., Jan 1 2019, In : Annals of Laboratory Medicine. 39, 2, p. 121-124 4 p.

Research output: Contribution to journalReview article

Diagnostic Errors
Delivery of Health Care
Budgets
Italy
Clinical laboratories

Reply

Roughneen, E. T., Conti, V. & Roughneen, P., Jan 1 2019, In : Annals of Thoracic Surgery. 107, 1, p. 325-326 2 p.

Research output: Contribution to journalLetter

Premature Birth
Research

Rhabdomyolysis attributed to terbinafine: A rare occurrence that can be mistaken for terbinafine-induced hepatotoxicity

Ly, P., Subrt, A. & Wilkerson, M., Jan 1 2019, In : JAAD Case Reports. 5, 1, p. 47-49 3 p.

Research output: Contribution to journalArticle

terbinafine
Rhabdomyolysis